Are you certain that the sound is lifter clatter and not the spark from a bad coil pack arcing to ground?
I would start by pulling and replacing the no. 2 coil pack...
Then, I would change the oil. Just because it's been run low....and use a good 5W30 synthetic...
Current Fleet:
2006 Corolla (kid's car - 108K, Conti Eco Contacts, Castrol Edge 5W30)
2005 MB S600 (63K, M1 0W40)
2002 V70-XC (165K, Nokian WR G2, Pennzoil Ultra 5W30)
2002 V70-T5 (143K, IPD bars, Bilsteins, Extreme Contact DWS, Mobil 1 5W40)
1992 MB 300E (Sportline - 123K, Nokian WR G2, Edge 5W40)
1990 4-Runner (V6, 4WD, mild lift - 239K, 31" BFG AT KO, Edge 10W30)
1932 Packard Sedan (straight 8, dual sidemount spares, original paint and interior, Shell Rotella 15W40)
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